Publications

2024

Trouche B, Schrieke H, Duron O, Eren AM, Reveillaud J* (2024). Wolbachia populations across organs of individual Culex pipiens: highly conserved intra-individual core pangenome with inter-individual polymorphisms, ISME Communications, Volume 4, Issue 1, https://doi.org/10.1093/ismeco/ycae078

2023

Gil P, Exbrayat A, Loire E, Rakotoarivony I, Charriat F, Morel C, Baldet T, Boisseau M, Marie A, Frances B, L’Ambert G, Bessat M, Otify Y, Goffredo M, Mancini G, Busquets N, Birnberg L, Talavera S, Aranda C, Ayari E, Mejri S, Sghaier S, Bennouna A, El Rhaffouli H, Balenghien T, Chlyeh G, Fassi Fihri O, Reveillaud J, Simonin Y, Eloit M, Gutierrez S (2023) . Spatial scale influences the distribution of viral diversity in the eukaryotic virome of the mosquito Culex pipiensVirus Evolution, Volume 9, Issue 2, 2023.

Bellone R, Lechat P, Mousson L, Gilbart V, Piorkowski G, Bohers C, Merits A, Kornobis E, Reveillaud J, Paupy C, Vazeille M, Martinet JP, Madec Y, De Lamballerie X, Dauga C, Failloux AB (2023). Climate change and vector-borne diseases: a multi-omics approach of temperature-induced changes in the mosquito.J Travel Med. 2023;30(4).

Ghousein A, Tutagata J, Schrieke H, Etienne M, Chaumeau V, Boyer S, Pages N, Roiz D, Eren AM, Cambray G, Reveillaud J* (2023). pWCP is a widely distributed and highly conserved Wolbachia plasmid in Culex pipiens and Culex quinquefasciatus mosquitoes worldwide. ISME Commun. 28;3(1):40.

2022

Aubé J, Cambon-Bonavita MA*, Velo-Suárez L, Cueff-Gauchard V, Lesongeur F, Guéganton M, Durand L, Reveillaud J*. (2022). A novel and dual digestive symbiosis scales up the nutrition and immune system of the holobiont Rimicaris exoculata. Microbiome 10, 189.

Lemonnier C, Chalopin M, Huvet A, Le Roux F, Labreuche Y, Petton B, Maignien L, Paul-Pont I, Reveillaud J. (2022). Time-series incubations in a coastal environment illuminates the importance of early colonizers and the complexity of bacterial biofilm dynamics on marine plastics, Environmental Pollution 1;312.

Schrieke H, Maignien L, Constancias F, Trigodet F, Chakloute S, Rakotoarivony I, Marie A, L’Ambert G, Makoundou P, Pages N, Eren A. M, Weill M, Sicard M, Reveillaud J*. (2022). The mosquito microbiome includes habitat-specific but rare symbionts. Comput and Struct Biotechn Journal, 20: 410-420.

2021        

Hoffert M, Anderson RE., Reveillaud J, Murphy LG, Stepanauskas R & Huber JA. (2021). Genomic Variation Influences Methanothermococcus Fitness in Marine Hydrothermal Systems. Frontiers in microbiology12, 714920.

Cambon-Bonavita MA, Aubé J, Cueff-Gauchard V, Reveillaud J* (2021). Niche partitioning in the Rimicaris exoculata holobiont: the case of the first symbiotic Zetaproteobacteria. Microbiome 9, 87.

Gil P, Dupuy V, Koual R, Exbrayat A, Loire E, Fall AG, Gimonneau G, Biteye B, Talla Seck M, Rakotoarivony I, Marie A, Frances B, Lambert G, Reveillaud J, Balenghien T, Garros C, Albina E, Eloit M, Gutierrez S. (2021). A library preparation optimized for metagenomics of RNA viruses. Mol Ecol Resour, 21: 1788-1807.

2019

Galambos, D., Anderson, R.E., Reveillaud, J. and Huber, J.A. (2019), Genome‐resolved metagenomics and metatranscriptomics reveal niche differentiation in functionally redundant microbial communities at deep‐sea hydrothermal vents. Environ Microbiol, 21: 4395-4410.

Zhang S, Song W, Wemheuer B, Reveillaud J, Webster N, Thomas T. (2019) Comparative genomics reveals ecological and evolutionary insights into sponge-associated Thaumarchaeota. mSystems 4:e00288-19.

Tsagmo Ngoune JM, Reveillaud J, Sempere G, Njiokou F, Melachio TT, Abate L, Tchioffo MT, Geiger A. (2019) The composition and abundance of bacterial communities residing in the gut of Glossina palpalis palpalis captured in two sites of southern Cameroon. Parasit. Vectors 12, 151 (2019).

Reveillaud J*+, Bordenstein SR+, Cruaud C, Shaiber A, Esen OC, Weill M, Makoundou P, Lolans K, Watson AR, Rakotoarivony I, Bordenstein SR, Eren* AM. (2019) The Wolbachia mobilome in Culex pipiens includes a putative plasmid. Nature Communications volume 10, Article number: 1051.

+ the authors contributed equally to this work

A ‘behing the paper’ blog post @ Nature Microbiology Community by Julie,  a press release from the Marine Biological Laboratory,  a French press release from INRA and the Picture of the Day from NSF.

2018 

Frère L, Maignien L, Chalopin M, Huvet A, Rinnert E, Morrison H, Kerninon S, Cassone AL, Lambert C, Reveillaud J+, Paul-Pont I+ (2018) Microplastic bacterial communities in the Bay of Brest: influence of polymer type and size. Environmental Pollution 242, 614-625.

+ the authors contributed equally to this work

Reveillaud J*, Anderson R, Reves-Sohn S, Cavanaugh C, Huber HA (2018). Metagenomic Investigation of Vestimentiferan Tubeworm Endosymbionts from Mid-Cayman Rise Reveals New Insights into Metabolism and Diversity. Microbiome 6 (1):19.

2017   

Anderson RE, Reveillaud J, Reddington E, Delmont TO, Eren AM, McDermot J, Seewald JS, Huber JA (2017) Genomic variation in microbial populations inhabiting the marine subseafloor at deep-sea hydrothermal vents. Nature communications 8.1 2017: 1114.

Jacob F, Melachio TT, Njitchouang GR, Gimonneau G, Njioukou F, Abate L, Christen R, Reveillaud J, Geiger A (2017) Intestinal Bacterial Communities of Trypanosome-Infected and Uninfected Glossina palpalis palpalis from Three Human African Trypanomiasis Foci in Cameroon. Frontiers in Microbiology  8:1464.

Lucas Moitinho-Silva, Shaun Nielsen, Amnon Amir, Antonio Gonzalez, Gail L. Ackermann, Carlo Cerrano, Carmen Astudillo-Garcia, Cole Easson, Detmer Sipkema, Fang Liu, Georg Steinert, Giorgos Kotoulas, Grace P. McCormack, Guofang Feng, James J. Bell, Jan Vicente, Johannes R. Björk, Jose M. Montoya, Julie B. Olson, Julie Reveillaud, Laura Steindler, Mari-Carmen Pineda, Maria V. Marra, Micha Ilan, Michael W. Taylor, Paraskevi Polymenakou, Patrick M. Erwin, Peter J. Schupp, Rachel L. Simister, Rob Knight, Robert W. Thacker, Rodrigo Costa, Russell T. Hill, Susanna Lopez-Legentil, Thanos Dailianis, Timothy Ravasi, Ute Hentschel, Zhiyong Li, Nicole S. Webster, Torsten Thomas (2017) The sponge microbiome project, Gigascience 6: 1–7.

2016               

Dalmasso C, Oger P, Selva G, Courtine D, L’Haridon S, Garlaschelli A, Roussel E, Miyazaki J, Reveillaud J, Jebbar M, Takai K, Maignien L, Alain K  (2016). Thermococcus piezophilus sp. nov., a novel hyperthermophilic and piezophilic archaeon with a broad pressure range for growth, isolated from a deepest hydrothermal vent at the Mid-Cayman Rise. Syst. Appl. Microbiol. 39: 440–444.

Carissimo, G., Eiglmeier, K., Reveillaud, J., Holm, I., Diallo, M., Diallo, D., Vantaux, A., Kim, S., Menard, D., Siv, S., Belda, E., Bischoff, E., Antoniewski, C., Vernick, K. D. (2016). Identification and Characterization of Two Novel RNA Viruses from Anopheles gambiae Species Complex MosquitoesPlos One, 11 (5), 20.

 Reveillaud J, Reddington E, McDermott J, Algar C, Meyer JL, Sylva S, Seewald J, German CR, Huber J.A. (2016). Subseafloor microbial populations in hydrogen-rich vent fluids from the Mid-Cayman Rise. Environmental Microbiology. 18: 1970–87.

 2015   

Eren AM, Morrison HG, Lescault PJ, Reveillaud J, Vineis JH, Sogin ML. (2015). Minimum Entropy Decomposition: Unsupervised oligotyping for sensitive partitioning of highthroughput marker gene sequences. The ISME Journal 9, 968-979.

2014

Schmidt VT, Reveillaud J, Zettler E, Mincer T, Murphy L, Amaral-Zettler L. (2014) Oligotyping reveals community level habitat selection in the genus VibrioFrontiers in Microbiology. 5: 1–14.

Apprill A, Robbins J, Eren AM, Pack AA, Reveillaud J, Mattila D, Moore M, Niemeyer M, Moore KMT, Miner TJ. (2014). Humpback whale populations share a core skin microbiome: towards a health index for marine mammals. PLoS ONE. e90785.

Reveillaud J*, Maignien L, Eren AM, Huber JA, Apprill A, Sogin ML, Vanreusel A. (2014). Host-specificity among abundant and rare taxa in the sponge microbiome. The ISME Journal 8, 1198-1209.

2012   

Reveillaud J*, Allewaert C, Pérez T, Vacelet J, Banaigs B, Vanreusel A. (2012) Relevance of an Integrative Approach for Taxonomic Revision in Sponge Taxa: Case Study of the Shallow-water Atlanto-Mediterranean Hexadella (Porifera, Ianthellidae). Invertebrate Systematics 26, 230–248.

 2011

Maignien L, Depreiter D, Foubert A, Reveillaud J, De Mol L, Boeckx P, Blamart D, Henriet, J-P, Boon N (2011). Anaerobic oxidation of methane in a cold-water coral carbonate mound from the Gulf of Cadiz. International Journal of Earth Sciences. 6 (100), 1413-1422.

Reveillaud J*, Van Soest R, Derycke S, Picton B, Rigaux A, Vanreusel A (2011). Phylogenetic relationships among NE Atlantic Plocamionida Topsent (1927) (Porifera, Poecilosclerida): Under-Estimated Diversity in Reef EcosystemsPLoS ONE 10.1371/journal.pone.0016533.

Cárdenas P, Xavier JR, Reveillaud J, Schander C, Tore Rapp H (2011). Molecular Phylogeny of the Astrophorida (Porifera, Demospongiaep) Reveals an Unexpected High Level of Spicule Homoplasy. PLoS ONE. Journal.pone-D-10-04301R1.

2010

Reveillaud J*, Remerie T, Van Soest R, Erpenbeck D, Cárdenas P, Derycke S, Xavier JR, Rigaux A, Vanreusel A (2010). Species boundaries and phylogenetic relationships between Atlanto-Mediterranean shallowwater and deep-sea coral associated Hexadella species (Porifera, Ianthellidae). Molecular Phylogenetics and Evolution 56 :104–114.

2008  

Reveillaud J*, Freiwald A, Van Rooij D, Foubert A, Le Guilloux E, Altuna A, Vanreusel A, Olu-Le-Roy K, Henriet JP (2008). The distribution of scleractinian corals in the Bay of Biscay, NE Atlantic. Facies 54, 317-331.

2007

Noé SU, Lembke-Jene L, Reveillaud J, Freiwald A (2007). Growth banding and age determination of a unique fossil primnoid gorgonian skeleton (Octocorallia) from the Bay of Biscay. Facies 53 (2): 177-188.

* corresponding author

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